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Ligand.Info

HOME: http://ligand.info/

Ligand.Info is a compilation of various publicly available databases of small molecules such as ChemBank, ChemPDB, KEGG, NCI, AKos GmbH, Asinex Ltd, and TimTec. The total size of the Meta-Database is 1 million entries. The compound records contain calculated three-dimensional coordinates and sometimes information about biological activity. Some molecules have information about FDA drug approving status or about anti-HIV activity. Meta-Database can be downloaded in SDF format and used for virtual high-throughput screening of new potential drugs. The database can also be screened using a Java-based tool.

Download whole Meta-Database in SDF format

à Ligand.Info Meta-Database 1,159,274 entries zip 0.5 GB

 

Download subset of Meta-Database in SDF format (ZIP file)

Database Name No. of Entries Download

 

ChemBank subset 2,344   1 MB  

 

ChemPDB subset 4,009   1 MB  

 

KEGG Ligand subset 10,005   4 MB  

 

Anti-HIV NCI subset 42,689   19 MB  

 

Drug-likeness NCI subset 192,323   67 MB  

 

Not annotated NCI subset 15,237   4 MB  

 

AKos GmbH subset 544,391   230 MB  

 

Asinex Ltd. subset 348,276   144 MB  

 

TimTec subset (new) 7,500   3 MB  
 
 

Please cite the Meta-Database:
von Grotthuss M, Koczyk G, Pas J, Wyrwicz LS, Rychlewski L "
Ligand.Info Small-Molecule Meta-Database" Comb Chem High Throughput Screen. 2004 Dec;7(8):757-61. [Library]

 
 
If you would like to add your compounds to the public Ligand.Info Database, please e-mail
Marcin von Grotthuss (mvg@bioinfo.pl) with cc to Leszek Rychlewski (leszek@bioinfo.pl)
 


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