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Mirror Sites
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Ligand.Info |
HOME:
http://ligand.info/ |
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Ligand.Info is a compilation of various publicly available
databases of small molecules such as
ChemBank,
ChemPDB,
KEGG,
NCI,
AKos GmbH,
Asinex Ltd, and
TimTec.
The total size of the Meta-Database is 1 million entries. The
compound records contain calculated three-dimensional
coordinates and sometimes information about biological activity.
Some molecules have information about FDA drug approving status
or about anti-HIV activity. Meta-Database can be downloaded in
SDF format and used for virtual high-throughput screening of new
potential drugs. The database can also be screened using a
Java-based tool.
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Download
whole
Meta-Database in SDF format |
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à
Ligand.Info
Meta-Database
1,159,274 entries
zip 0.5 GB |
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Download
subset of
Meta-Database in SDF format (ZIP file) |
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Database Name |
No. of Entries |
Download |
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ChemBank subset |
2,344 |
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1
MB |
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ChemPDB subset |
4,009 |
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1 MB |
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KEGG Ligand subset |
10,005 |
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4
MB |
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Anti-HIV NCI subset |
42,689 |
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19
MB |
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Drug-likeness NCI subset |
192,323 |
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67
MB |
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Not annotated NCI subset |
15,237 |
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4
MB |
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AKos GmbH subset |
544,391 |
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230
MB |
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Asinex Ltd. subset |
348,276 |
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144
MB |
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TimTec subset (new) |
7,500 |
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3
MB |
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Please cite the Meta-Database:
von Grotthuss M, Koczyk G, Pas J, Wyrwicz LS, Rychlewski L "Ligand.Info
Small-Molecule Meta-Database"
Comb Chem High Throughput Screen. 2004 Dec;7(8):757-61. [Library] |
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If you would like
to add your compounds to the public Ligand.Info Database,
please e-mail
Marcin von Grotthuss (mvg@bioinfo.pl) with cc to Leszek
Rychlewski (leszek@bioinfo.pl) |
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