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51. Sangeetha, B.; Muthukumaran, R.; Amutha, R., structural dynamics of native and V260E mutant C-terminal domain of HIV-1 integrase, Journal of Computer-Aided Molecular Design, , 2016, 29 (4), 371-385;
52. Chinta, G.; Ramya Chandar Charles, M.; Klopcic, I.; Sollner Dolenc, M.; Periyasamy, L.; Selvaraj Coumar, M.,, In Silico and in Vitro Investigation of the Piperines Male Contraceptive Effect: Docking and Molecular Dynamics Simulation Studies in Androgen-Binding Protein and Androgen Receptor, , Planta medica, 2016, 81 (10), 804-812;
53. Sarvagalla, S.; Cheung, C.H.A.; Tsai, J.Y.; Hsieh, H.P.; Coumar, M.S.,, Disruption of protein-protein interactions: hot spot detection, structure-based virtual screening and in vitro testing for the anti-cancer drug target - survivin, , Royal Society Of Chemistry, 2016, 6, 31947-31959
54. Vishwambhar V.B.; Amutha R., Identification of Potent siRNA Molecules for TDP43 Mutants causing Amyotrophic lateral Sclerosis: a computational study, Computational Biology and Chemistry, , 2016, 61, 97–108.
55. Syed, S. B.; Coumar, M. S.,, P-Glycoprotein Mediated Multidrug Resistance Reversal by Phytochemicals: A Review of SAR & Future Perspective for Drug Design, , Current topics in medicinal chemistry, 2016, 6, 2484-2508
56. Vishwambhar V. B.; Amutha R., Structural dynamics of human Argonaute2 and its interaction with siRNAs designed to target mutant tdp43, Advances in Bioinformatics, , 2016, http://dx.doi.org/10.1155/2016/8792814
57. Sailu Sarvagalla, Chun Hei Antonio Cheung, Ju-Ya Tsai, Hsing Pang Hsieh and Mohane Selvaraj Coumar*, DISRUPTION OF PROTEIN�PROTEIN INTERACTIONS: HOT SPOT DETECTION, STRUCTURE-BASED VIRTUAL SCREENING AND IN VITRO TESTING FOR THE ANTI-CANCER DRUG TARGET - SURVIVIN, , Royal Society Of Chemistry, 2016, 6, 31947-31959
58. Dinakar R. Ampasala, M. Pritika, Mohane Selvaraj Coumar and Amouda Venkatsan, MINING PLUTELLA XYLOSTELLA EXPRESSED SEQUENCE TAGS (EST) FOR A FUNCTIONALLY ANNOTATED CANDIDATE GENE INDEX, , Indian journal of Agricultural Research, 2016, 50 (1), 33-38
59. Dinakar R. Ampasala, M. Pritika, Mohane Selvaraj Coumar and Amouda Venkatsan, Mining Plutella Xylostella?S Expressed Sequence Tags (Est) For A Functionally Annotated Candidate Gene Index, Indian Journal of Plant Physiology, Indian J. Agric. Res., 2016, 50 (1), 33-38
61. Meena C.K.; Borkotoky, S.; Murali, A., Insight into virus encapsulation mechanism through in silico interaction study between coat protein and RNA operator loops of Sesbania mosaic virus, , Molecular Biosystems, 2016, DOI: 10.1039/C6MB00206D.
62. Gopu, V.; Meena, C. K.; Murali, A.; Shetty, P. H., Quorum quenching activity in the cell-free lysate of Enterobacter ludwigii isolated from beef and its effect on quorum sensing regulation in Yersinia enterocolitica, , RSC Advances, 2016, 6 (25), 21277-21284;
63. Ampasala, D.R.; Pritika, M.; Coumar, M.S.; Venkatsan, A., Mining plutella xylostellas expressed sequence tags (EST) for a functionally annotated candidate gene index., , Indian Journal of Agricultural Research, 2016, 50 (1), 33-38
65. Gopu, V.; Meena, C. K.; Murali, A.; Shetty, P. H., Petunidin as a competitive inhibitor of acylated homoserine lactones in Klebsiella pneumoniae, , RSC Advances, 2016, 6 (4), 2592-2601.
66. P, B. K.; K, K. V.; S, T. D.; R, S. K.; Doucet, D.; Retnakaran, A.; Krell, P. J.; Feng, Q.; Ampasala, D. R., , Molecular cloning and structural characterization of Ecdysis Triggering Hormone from Choristoneura fumiferana, , International journal of biological macromolecules, 2016, 88, 213-221
67. Bharathi, A. C.; Yadav, P. K.; Syed Ibrahim, B., Sequence diversity and ligand-induced structural rearrangements of viper hyaluronidase, , Molecular Biosystems, 2016, 12 (4), 1128-38
68. Shaik, J. B.; Palaka, B. K.; Penumala, M.; Eadlapalli, S.; Darla, M. M.;Vadde, R.; Amooru, D. G., Synthesis, biological evaluation and molecular docking of 8-imino-2-oxo-2H,8H-pyrano[2,3-f]chromene analogues: New dual AChE inhibitors as potential drugs for the treatment of Alzheimers disease., , Chemical biology & drug design, 2016, Volume 88, Issue 1 July 2016 Pages 43–53
70. Subastri, A.; Durga, A.; Harikrishna, K.; Sureshkumar, M.; Jeevaratnam, K.; Girish, K. S.; Thirunavukkarasu, C, Exploration of disulfiram dealings with calf thymus DNA using spectroscopic, electrochemical and molecular docking techniques, , Journal of Luminescence, 2016, 170, 255-261;
71. Veena, V. K.; Kennedy, K.; Lakshmi, P.; Krishna, R.; Sakthivel, N, Anti-leukemic, anti-lung, and anti-breast cancer potential of the microbial polyketide 2, 4-diacetylphloroglucinol (DAPG) and its interaction with the metastatic proteins than the antiapoptotic Bcl-2 proteins, , Molecular and cellular biochemistry, 2016, 414 (1-2), 47-56
74. Arya, H.; Coumar, M. S.,, Virtual screening of traditional Chinese medicine (TCM) database: identification of fragment-like lead molecules for filariasis target asparaginyl-tRNA synthetase, Journal of Molecular Modelling, , 2016, 20 (6), 2266;
75. Sharma, O. P.; Kumar, M. S, Essential proteins and possible therapeutic targets of Wolbachia endosymbiont and development of FiloBase-a comprehensive drug target database for Lymphatic filariasis, , Scientific reports, 2016, 6, 19842
76. , Evolution of the SRGAP2 Gene Is Linked to Intelligence in Mammals., , Biomed Hub S.Karger AG,Basel, 2016, 1:1-12 (DOI: 10.1159/000443947)
77. Kumaravel Mohankumar, Sankar Pajaniradje, Subhashree Sridharan, Vivek Kumar Singh, Larance Ronsard, Akhil C Banerjea, Chellakkan S Benson, Mohane Selvaraj Coumar, Latha Periyasamy, Rajagopalan Rukkumani, MOLECULAR MECHANISM OF APOPTOTIC INDUCTION BY AN ANALOG OF CURCUMIN, BDMC-A IN HUMAN LARYNGEAL CARCINOMA CELL LINE (HEP-2) THROUGH EXTRINSIC AND INTRINSIC PATHWAYS IN COMPARISON WITH CURCUMIN: AN IN VITRO - IN SILICO STUDY, , Cell Oncology, 2016, 37,439-454
78. Hsing-Pang Hsieh, Mohane Selvaraj Coumar, Tsu-An Hsu, Wen-Hsing Lin, Yi-Rong Chen and Yu-Sheng Chao, USED BICYCLIC AND TRICYCLIC PYRIMIDINE COMPOUNDS AS TYROSINE KINASE INHIBITORS, , , 2016, US8507502B2
79. Hsing-Pang Hsieh, Mohane Selvaraj Coumar, John T.-A. Hsu, Su-Ying Wu and Yu-Sheng Chao, FUSED BICYCLIC PYRIMIDINE COMPOUNDS AS AURORA KINASE INHIBITORS, , , 2016, US8138194B2
80. Hsing-Pang Hsieh, Mohane Selvaraj Coumar and Yu-Sheng Chao, FUSED MULTICYCLIC COMPOUNDS AS PROTEIN KINASE INHIBITORS, , , 2016, EP2331530B1
82. Surampudi Durga Karteek, I. V. Kasi Viswanath, Mandava V. Basaveswara Rao, Sapam Tuleshwori Devi , Design, synthesis and docking study of novel coumarin based 1,3-oxazine derivatives as probable anti-cancer drugs., , Der Pharma Chemica, 2016, 8(15):46-60
83. Raveendra Aanangi., Kasi Viswanath Kotapati., Bhagath Kumar Palaka., Thyagaraju Kedam., Nirmala Devi Kanika., Purification and characterization of lipoxygenase from mung bean (Vigna radiata L.) germinating seedlings, , 3 Biotech , 2016, 6:113 DOI 10.1007/s13205-016-0427-5
84. Mohankumar, K.; Sridharan, S.; Pajaniradje, S.; Singh, V. K.; Ronsard, L.; Banerjea, A. C.; Somasundaram, D. B.; Coumar, M. S.; Periyasamy, L.; Rajagopalan, R.,, BDMC-A, an analog of curcumin, inhibits markers of invasion, angiogenesis, and metastasis in breast cancer cells via NF-?B pathway-A comparative study with curcumin, , Biomedicine & Pharmacotherapy, 2016, 74, 178-186;
85. Subhomoi Borkotoky, Chetan Kumar Meena, and Ayaluru Murali, Interaction Analysis of T7RNA Polymerase with Heparin and its Low Molecular Weight Derivatives – An in silico Approach, , Bioinformatics and Biology Insights , 2016, 10: 155-166. doi : 10.4137/BBI.S40427
86. Bhagath Kumar P., Kasi Viswanath K, Tuleswori Devi S, Sampath Kumar R, Daniel Doucet, Arthur Retnakaran, Peter J. Krell, Qili Feng , Molecular Cloning and Strucutural characterization of Ecdysis Triggering Hormone from Choristoneura fumiferana, , International Journal of Biological Macromolecules, 2016, 88, 213-221
87. Muthu, K.; Panneerselvam, M.; Topno, N. S.; Ramadas, K., Structural transition of ETS1 from an auto-inhibited to functional state upon association with the p16INK4a native and mutated promoter region, , RSC Advances, 2016, 6 (19), 15960-15975
88. 1. A. Kumar, P.L. Thotakura, Basant K Tiwary and Ramadas Krishna , Target identification in Fusobacterium nucleatum by subtractive genomics approach and enrichment analysis of host-pathogen protein-protein interactions, , BMC microbiology, 2016, 16, 84
89. Pan, A.; Lahiri, C.; Rajendiran, A.; Shanmugham, B, Computational analysis of protein interaction networks for infectious diseases, Briefings in Bioinformatics, , 2015, 1,10.
90. Suyavaran, A.; Ramamurthy, C.; Mareeswaran, R.; Shanthi, Y. V.; Selvakumar, J.; Mangalaraj, S.; Kumar, M. S.; Ramanathan, C. R.; Thirunavukkarasu, C, Synthesis and biological evaluation of isoindoloisoquinolinone, pyroloisoquinolinone and benzoquinazolinone derivatives as poly(ADP-ribose) polymerase-1 inhibitors, , Bioorganic & medicinal chemistry, 2015, 23 (3), 488-98;
91. Shaik, J. B.; Palaka, B. K.; Penumala, M.; Kotapati, K. V.; Devineni, S. R.; Eadlapalli, S.; Darla, M. M.; Ampasala, D. R.; Vadde, R.; Amooru, G. D.,, Synthesis, pharmacological assessment, molecular modeling and in silico studies of fused tricyclic coumarin derivatives as a new family of multifunctional anti-Alzheimer agents, European journal of medicinal chemistry, , 2015, 107, 219-232
92. Kotapati, K. V.; Palaka, B. K.; Anangi, R.; Kedam, T.; Ampasala, D. R.,, Cloning and characterization of lipoxygenase gene from germinating seedlings of green gram (Vigna radiata L.), Indian Journal of Plant Physiology, , 2015, 20 (4), 345-352
93. Chikhale, R.; Thorat, S.; Pan, A.; Jadhav, A.; Thatipamula, K. C.; Bansode, R.; Bhargavi, G.; Karodia, N.; Rajasekharan, M. V.; Paradkar, A.; Khedekar, P., Design, synthesis and pharmacological evaluation of pyrimidobenzothiazole-3-carboxylate derivatives as selective L-type calcium channel blockers, , Bioorganic & medicinal chemistry, 2015, 23 (20), 6689-713
94. Subhomoi Borkotoky, Chetan Kumar Meena, Aswathy Soman, Ayaluru Murali , Insight into the LGP2 Helicase Domain – An in Silico Approach, , Intl J Biochem Biophy, 2015, 3:13-23
95. Chinta, G.; Syed, S. B.; Coumar, M. S.; Periyasamy, L.,, Piperine: A comprehensive review of pre-clinical and clinical investigations., , Current Bioactive Compounds, 2015, 11 (3), 156-169;
96. Parthiban, A.; Muthukumaran, J.; Manhas, A.; Srivastava, K.; Krishna, R.; Rao, H. S. P, Synthesis, in vitro and in silico antimalarial activity of 7-chloroquinoline and 4H-chromene conjugates, , Bioorganic and Medicinal Chemistry Letters, 2015, 25 (20), 4657-4663
97. Subastri, A.; Ramamurthy, C. H.; Suyavaran, A.; Mareeswaran, R.; Lokeswara Rao, P.; Harikrishna, M.; Suresh Kumar, M.; Sujatha, V.; Thirunavukkarasu, C, Spectroscopic and molecular docking studies on the interaction of troxerutin with DNA. , , International journal of biological macromolecules, 2015, 78, 122-9
98. Parthiban, A.; Kumaravel, M.; Muthukumaran, J.; Rukkumani, R.; Krishna, R.; Surya Prakash Rao, H, Design, synthesis, in vitro and in silico anti-cancer activity of 4H-chromenes with C4-active methine groups, , Medicinal Chemistry Research, 2015, 24 (3), 1226-1240
99. Subastri, A.; Ramamurthy, C. H.; Suyavaran, A.; Lokeswara Rao, P.; Preedia Babu, E.; Hari Krishna, K.; Suresh Kumar, M.; Thirunavukkarasu, C, Probing the interaction of troxerutin with transfer RNA by spectroscopic and molecular modeling, , Journal of photochemistry and photobiology. B, Biology, 2015, 153, 137-44



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