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151. Annamalai, A.; Christina, V. L. P.; Christina, V.; Lakshmi, P. T. V, Green synthesis and characterisation of Ag NPs using aqueous extract of Phyllanthus maderaspatensis L, , Journal of Experimental Nanoscience, 2014, 9 (2), 113-119
152. R. Vasundhara Devi, S. Siva Sathya, Mohane Selvaraj Coumar, Multi-objective genetic algorithm for de novo drug design, , international journal of soft computing and engineering, 2014, 4 (2), 92-96
153. Amit Jaiswal and Lakshmi P.T.V, Molecular Inhibition Of Telomerase Recruitment Using Designer Peptides: An In-Silico Approach, , Journal of Biomolecular Structure & Dynamics, 2014, 0739-1102 (Print), 1538-0254 (Online) Taylor and Francis group
154. Kumaravel Mohankumar, Sankar Pajaniradje, Subhashree Sridharan, Vivek Kumar Singh, Larance Ronsard, Akhil C Banerjea, Chellakkan S Benson, Mohane Selvaraj Coumar, Rukkumani Rajagopalan, MECHANISM OF APOPTOTIC INDUCTION IN HUMAN BREAST CANCER CELL, MCF-7, BY AN ANALOG OF CURCUMIN IN COMPARISON WITH CURCUMIN - AN IN VITRO AND IN SILICO APPROACH, , Chemico-biological interactions, 2014, 210, 51-63
155. Nidhi Rani, Lakshmi PTV, Saravanan V and Annamalai A , An insight in to the potentially old-wonder molecule-Quercetin: the perspective in foresee, , Chinese journal of integrative medicine, 2014, ISSN: 1672-0415
156. Nidhi Rani, V. Saravanan, P. T. V. Lakshmi and A. Annamalai, Inhibition of Pore Formation by Blocking the Assembly of Staphylococcus aureus a-Hemolysin Through a Novel Peptide Inhibitor: an In Silico Approach., Springer, , 2014, ISSN: 1573-3904
157. Saravanan, V.; Lakshmi, P. T. V, FuzzyApp : A fuzzylogic based allergen predictor., Integrative Biology, , 2014, ISSN: 1536-2310 Online ISSN: 1557-8100 Mary Ann Liebert Inc. Publishers
158. Ankush Jadav, Buvaneswari Shanmugham, Anjana Rajendiran, Archana Pan, Unraveling novel broad-spectrum antibacterial targets in food and waterborne pathogens using comparative genomics and protein interaction network analysis, , Infect Genet Evol, 2014, Vol. 27, 300-308
159. Lakshmi P.T.V, Sathya Priya and Annamalai A , Detection and Comparative Analysis of Uber-operons of FabZ gene Responsible for Fatty Acid Biosynthesis in Nostoc Punctiforme Cyanobacterium, , Research & Reviews: A Journal of Bioinformatics, 2014, 1(1): 36-45
160. Vijayalakshmi Ezhilarasan, Ankush Jadav, Archana Pan,, Screening of potent antibacterial agents targeting Clostridium difficile virulence factor toxin B: An in silico approach, , Med Chem Res, 2014, DOI 10.1007/s00044-014-1017-x
161. Saravanan, V.; Lakshmi, P. T. V, Dualpred: A Webserver For Predicting Plant Proteins Dual-Targeted To Chloroplast And Mitochondria Using Split Protein-Relatedness-Measure Feature., Current Bioinformatics, , 2014, ISSN: 2212-392X (Online) Bentham Science Publisher
162. Annamalai, A., V.L.P. Christina, V. Christina and P.T.V. Lakshmi, Green synthesis and characterization of Ag NPs using aqueous extract of Phyllanthus maderaspatensis L, , Journal of Experimental Nanoscience, 2014, 9: 2, 113-119. ISSN 1745-8080 (Print), 1745-8099 (Online)
163. Muthu, K.; Panneerselvam, M.; Topno, N. S.; Jayaraman, M.; Ramadas, K., Structural perspective of ARHI mediated inhibition of STAT3 signaling: An insight into the inactive to active transition of ARHI and its interaction with STAT3 and importin�, , Cellular signalling, 2014, 27 (4), 739-755
164. Thirunavukarasou, A.; Govindarajalu, G.; Singh, P.; Bandi, V.; Muthu, K.; Baluchamy, S., Cullin 4A and 4B ubiquitin ligases interact with ?-tubulin and induce its polyubiquitination, Molecular & Cellular Proteomics, Molecular and cellular biochemistry , 2014, 401 (1-2), 219-228;
165. Chandrasekar, S.; Sharma Om, P.; Srinivasapriyan, V.; SureshKumar, M.; Ramanathan, C. R., Ethyl trans-12-(pyridin-4-yl)-9,10-ethano-anthracene-11-carboxyl-ate. Acta crystallographica, , Acta crystallographica. Section E, Structure reports online, 2014, 70 (Pt 5), o512;
166. Cheung, C.H.A.; Sarvagalla, S.; Lee, J.Y.C.; Huang, Y.C.; Mohane Selvaraj Coumar,, Aurora kinase inhibitor patents and agents in clinical testing: an update, , Expert opinion Therapeutic Patents, 2014, 24 (9), 1021-1038.
167. Banavath, H. N.; Sharma, O. P.; Kumar, M. S.; Baskaran, R., Identification of novel tyrosine kinase inhibitors for drug resistant T315I mutant BCR-ABL: a virtual screening and molecular dynamics simulations study, , Scientific reports , 2014, 4, 6948;
168. Shao, Y.; Wang, B.; Shi, D.; Miao, S.; Manivel, P.; Krishna, R.; Chen, Y.; Eric Shi, Y, Synuclein gamma protects HER2 and renders resistance to Hsp90 disruption, , Molecular oncology, 2014, 8 (8), 1521-31
169. Parthiban, A.; Muthukumaran, J.; Moushumi Priya, A.; Jayachandran, S.; Krishna, R.; Surya Prakash Rao, H, Design, synthesis, molecular docking, and biological evaluation of N-methyl-3-nitro-4-(nitromethyl)-4H-chromen-2-amine derivatives as potential anti-cancer agents, , Medicinal Chemistry Research, 2014, 23 (2), 642-659
170. Devi, R.V.; Sathya, S.S.; Coumar, M.S, GAMOL: Genetic algorithm based de novo molecule generator, , Conf. on Adv. in Comp., Comm., and Inf. Sci, 2014, (ACCIS-14) (259–265)
171. Devi, S. T.; Dutta, A.; Palaka, B. K.; Khan, M. B.; Viswanath, K., Identification and validation of CCR5 antagonists from maraviroc analogs by pharmacophore modelling and 3D-QSAR studies, , Current Drug Therapy, 2014, 9 (3), 188-198
172. Lakshmi P.T.V, Pragna Lakshmi T and Annamalai A, Insilico Modelling and Comparative Docking Studies of EWS-FLI1 Responsible for Ewing Sarcoma in Human Beings, , Research & Reviews: A Journal of Bioinformatics, 2014, 1(1): 36-45
174. Mohane Selvaraj Coumar, Fang-Ying Tsai, Jagat Rakesh Kanwar, Sailu Sarvagalla, Chun Hei Antonio Cheung, TREAT CANCERS BY TARGETING SURVIVIN: JUST A DREAM OR FUTURE REALITY? , , Cancer Treatment Reviews, 2013, 39, 802-811
175. Borkotoky S, Meena CK, Khan MW, Murali A, Three dimensional electron microscopy and in silico tools for macromolecular structure determination., , EXCLI Journal, 2013, 12: 335-346.
176. Borkotoky S, Saravanan V, Jaiswal A, Das B, Selvaraj S, Murali A, Lakshmi PTV, The Arabidopsis Stress Responsive Gene Database, , Intl J Plant Genomics, 2013, ID 949564
177. Annamalai, V.L.P. Christina, D. Sudha, Kalpana, P.T.V. Lakshmi, Green synthesis, characterization and antimicrobial activity of Au NPs using Euphorbia hirta L. leaf extract., Elsevier, , 2013, 108: 60– 65
178. S. Borkotoky, V. Saravanan, A. Jaiswal, B. Das, S. Selvaraj, A. Murali and P.T.V.Lakshmi, The Arabidopsis Stress Responsive Gene Database, , International Journal of Plant Genomics, 2013, 1:1-3
179. Shiva Kumar.E., Viswanath.K.K, Bhagath.K.P., Vijayalakshmi.D., Dinakara Rao. A., Antimicrobial Effect Of Lipoxygenase Mediated Primary Phyto-Oxylipins from Horse Gram (Dolichos Bifloruse) Germinating Seedlings On Common Microbial Flora., , International Journal of Recent Scientific Research., 2013, Vol. 4(12)1979-1982
181. , Correlated evolution of Gonadotropin-Releasing Hormone and Gonadotropin-Inhibitory Hormone and their receptors in mammals., , S.Karger AG,Basel, 2013, 97:242-251
182. Vaishnavi V, Manikandan M, Munirajan AK, Insights on the Functional Impact of MicroRNAs Present in Autism-Associated Copy Number Variants, PLoS One, , 2013, 8(2): e56781. DOI:10.1371/journal.pone.0056781
183. Hui-Yi Shiao, Mohane Selvaraj Coumar, Chun-Wei Chang, Yi-Yu Ke, Ya-Hui Chi, Chang-Ying Chu, Hsu-Yi Sun, Chun-Hwa Chen, Wen-Hsing Lin, Ka-Shu Fung, Po-Chu Kuo, Chin-Ting Huang, Kai-Yen Chang, Cheng-Tai Lu, John T. A. Hsu, Chiung-Tong Chen, Weir-Torn Jiaang, Optimization of Ligand and Lipophilic Efficiency To Identify an in Vivo Active Furano-Pyrimidine Aurora Kinase Inhibitor, , journal of medicinal chemistry, 2013, 56, 5247-5260
184. Yi-Hui Peng, Hui-Yi Shiao, Chih-Hsiang Tu, Pang-Min Liu, John Tsu-An Hsu, Prashanth Kumar Amancha, Jian-Sung Wu, Mohane Selvaraj Coumar, Chun-Hwa Chen, Sing-Yi Wang, Wen-Hsing Lin, Hsu-Yi Sun, Yu-Sheng Chao, Ping-Chiang Lyu, Hsing-Pang Hsieh, and suying w, Protein kinase inhibitor design by targeting the Asp-Phe-Gly (DFG) motif: the role of the DFG motif in the design of epidermal growth factor receptor inhibitors, , journal of medicinal chemistry, 2013, 56,3889-3903
185. Jiun-Ming Wu, Chiung-Tong Chen, Mohane Selvaraj Coumar, Wen-Hsin Lin, Zi-Jie Chen, John T.-A. Hsu, Yi-Hui Peng, Hui-Yi Shiao, Wen-Hsing Lin, Chang-Ying Chu, Jian-Sung Wu, Chih-Tsung Lin, Ching-Ping Chen, Ching-Cheng Hsueh, Kai-Yen Chang, Li-Pin Kao, Chi-Y, AURORA KINASE INHIBITORS REVEAL MECHANISMS OF HURP IN NUCLEATION OF CENTROSOMAL AND KINETOCHORE MICROTUBULES, Proceedings of the National Academy of Sciences, , 2013, 110, E1779-E1787
186. Yi-Yu Ke, Hui-Yi Shiao, Yung Chang Hsu, Chang-Ying Chu, Wen-Chieh Wang, Yen-Chun Lee, Wen-Hsing Lin, Chun-Hwa Chen, John T. A. Hsu, Chun-Wei Chang, Chen g-Wei Lin, Teng-Kuang Yeh, Yu-Sheng Chao, Mohane Selvaraj Coumar,* and Hsing-Pang Hsie, 3D-QSAR Assisted Drug Design: Identification of a Potent Qu inazoline Based Aurora Kinase Inhibitor, , chemmedchem journal, 2013, 8, 136-148
187. Buvaneswari Shanmugham, Archana Pan, Identification and characterization of potential therapeutic candidates in emerging human pathogen Mycobacterium abscessus: A novel hierarchical in silico approach, PLoS One, , 2013, Vol.8 (Issue 3), e59126
188. Ankush Jadav, Vijayalakshmi Ezhilarasan, O.P. Sharma, Archana Pan, Clostridium-DTdb:A comprehensive database for potential drug targets of Clostridium difficile, , Comput Biol Med, 2013, Vol. 43, 362,367.
189. Saravanan, V.; Lakshmi, P. T. V, SCLAP: An Adaptive Boosting Method for Predicting Sub- chloroplast Localization of Plant Proteins, Integrative Biology, , 2013, 17 (2): 106-115
190. Vijayalakshmi Ezhilarasan, O.P. Sharma, Archana Pan, In silico identification of potential drug targets in Clostridium difficile R20291: Modeling and virtual screening analysis of a candidate enzyme MurG, , Med Chem Res, 2013, Vol. 22 (Issue 6), 2692-2705
191. Jayaprakash. C, P.T.V. Lakshmi and Ondari. N. E., Molecular modeling approach and RMSD calibration for superimposed 3D structure of DHFR from Pneumocystis jiroveci, , AmericaN Journal Of PharmaTech Research, 2013, 3(1): 1-15
192. Ithayaraja C. M and P.T.V. Lakshmi, Sequence Analysis For Structure And Function Characterization Of Glutathione Reductase From Nostoc Sp., , International Journal of Universal Pharmacy and Bio Sciences , 2013, 2(2): 9-47
193. Amouda Nizam, Buvaneswari Shanmugham, Self-Organizing Genetic Algorithm: A Survey Digital Library, , International Journal of Computer Applications, 2013, Volume 65, pp-18
194. Subhashini R and P.T.V. Lakshmi , Comparative Computational Analysis of Cystic Fibrosis Transmembrane Conductance Regulator Protein to Treat Lung Infections., , International Journal of Medical Engineering and Informatics, 2012, 4(4):351-361
195. P.T.V. Lakshmi , Devi Priyanka, A. Annamalai, Study on the Docking Analysis of Homocitrate Synthase Responsible for Hydrogen Production in Nostoc Punctiforme ATCC29133, , American Journal of Bioinformatics Research. , 2012, 2(6): 110-118
196. M. Kannan, P. Manivel, K. Geetha, J. Muthukumaran, H. Surya Prakash Rao and R. Krishna, Synthesis and in silico evaluation of 1N-methyl-1S-methyl-2-nitroethylene (NMSM) derivatives against Alzheimer disease: to understand their interacting mechanism with acetylcholinesterase, , J Chem Biol, 2012, 5:151-166. DOI: 10.1007/s12154-012-0084-z
197. Ponmari .G, Annamalai. A, Lakshmi P.T.V. , Evaluation of phytochemical constituents and antioxidant activities of successive solvent extracts of leaves of Indigofera caerulea Roxb using variousin vitro antioxidant assay systems, Elsevier, Asian Pacific Journal of Tropical Disease, 2012, S118-S123
198. Kannan Muthu, Manivel Panneerselvam, Muthukumaran Jayaraman, Nishith Saurav Topno, Arindam Atanu Das and Krishna Ramadas, Structural insights into interacting mechanism of ID1 protein with an antagonist ID1/3-PA7 and agonist ETS-1 in treatment of ovarian cancer: molecular docking and dynamics studies, , J Mol Model, 2012, DOI: 10.1007/s00894-012-1489-x
199. R.Sathiskumar, P.T.V. Lakshmi and A.Annamalai, Estimation of biomass contents and phytoconstituent analysis of Enicostemma littorale blume, , Int. J. Pharma and Bio Sciences, 2012, 3(3): 506 - 522
200. Jayaprakash Chinnappan and Palanisamy Thangavelan Lakshmi, High-throughput virtual screening for novel DHFR inhibitors of P. Jiroveci from the zinc database, , Int. J. Applied biology and pharmaceutical technology, 2012, 3(4):425-438

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May 2022