- Correction to: RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs
- Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
- Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
- FastProNGS: fast preprocessing of next-generation sequencing reads
- Laboratory information management software for engineered mini-protein therapeutic workflow
- Performance assessment of variant calling pipelines using human whole exome sequencing and simulated data
- Machine learning with the TCGA-HNSC dataset: improving usability by addressing inconsistency, sparsity, and high-dimensionality
- Aneuvis: web-based exploration of numerical chromosomal variation in single cells
- Filtering procedures for untargeted LC-MS metabolomics data
- Correction to: VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer
- iTUPA: An online automated application to perform Topographic-Unit Parsimony Analysis
- Sequence alignment using machine learning for accurate template-based protein structure prediction
- DNN-Dom: predicting protein domain boundary from sequence alone by deep neural network
- DECENT: Differential Expression with Capture Efficiency adjustmeNT for single-cell RNA-seq data
- BAMixChecker: an automated checkup tool for matched sample pairs in NGS cohort
- Mycorrhiza: Genotype Assignment using Phylogenetic Networks
- SCANVIS: a tool for SCoring, ANnotating and VISualizing splice junctions
- Chicdiff: a computational pipeline for detecting differential chromosomal interactions in Capture Hi-C data
- MetOSite: an integrated resource for the study of methionine residues sulfoxidation
- An Empirical Bayesian ranking method, with applications to high throughput biology
Whats new in Bioinformatics
Genome Biology
- Correction to: RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs
- Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
- Correction to: VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer
- Current status and applications of genome-scale metabolic models
- Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana
- Codon usage optimization in pluripotent embryonic stem cells
- A practical guide to methods controlling false discoveries in computational biology
- Single-cell transcriptomics unveils gene regulatory network plasticity
- Haplotype-aware diplotyping from noisy long reads
- Collateral damage: benchmarking off-target effects in genome editing